Commit graph

922 commits

Author SHA1 Message Date
Christian Zimmermann
72ca92a08c Merge branch 'fix' into dev 2024-05-15 23:11:12 +02:00
Christian Zimmermann
ecd279e5b7 base/utils.h: add algorithm library (seems to be neccessary on newer systems) 2024-05-15 18:11:38 +02:00
Christian Zimmermann
ad4c0f177e im com 2024-05-06 02:36:56 +02:00
Christian Zimmermann
137e9ab463 fixes + WIP: rop test 2024-05-01 23:59:25 +02:00
Christian Zimmermann
be33c429bf more operation tests + fix SFor (compatibility with For) + more RIndex utils 2024-04-28 20:06:00 +02:00
Christian Zimmermann
af32689c00 mpi rarray: improve setupBuffer 2024-04-28 01:29:37 +02:00
Christian Zimmermann
1d77098670 fixes 2024-04-22 01:03:26 +02:00
Christian Zimmermann
e5782ac327 obj_handle: get function + RArray 2024-04-22 00:38:35 +02:00
Christian Zimmermann
066e267753 WIP: roperation_unit_test + WIP: RBIndex + fixes... 2024-04-21 21:27:00 +02:00
Christian Zimmermann
f6a3ef64cc WRange: tests + fixes 2024-04-20 20:22:49 +02:00
Christian Zimmermann
e8b6dd9f4d add WRange (same as URange but with arbitrary meta data ordering) 2024-04-18 18:01:19 +02:00
Christian Zimmermann
9ea47a20a3 arrays: formatIsTrivial -> public 2024-04-18 13:56:24 +02:00
Christian Zimmermann
0cc0a7cea4 mpi rarray load 2024-04-18 12:14:56 +02:00
Christian Zimmermann
6e16927442 mpi: rarray: use setupBuffer function 2024-04-16 09:09:26 +02:00
Christian Zimmermann
a037598775 complete WIPs from previous commit 2024-04-15 23:03:55 +02:00
Christian Zimmermann
adfb0fda67 WIP: reorder mpi code + map xpr + pos op 2024-04-15 19:19:21 +02:00
Christian Zimmermann
5ed0d6bbcb WIP: rarray load
Some checks failed
ci/woodpecker/manual/woodpecker Pipeline failed
2024-04-15 01:23:42 +02:00
Christian Zimmermann
6980bb5fdf rop_types 2024-04-14 16:45:29 +02:00
Christian Zimmermann
fae345f455 WIP: rank array member function implementations 2024-04-14 01:45:15 +02:00
Christian Zimmermann
97f28975d5 im com 2024-04-07 17:01:53 +02:00
Christian Zimmermann
aa5af48111 im com 2024-04-07 02:35:43 +02:00
Christian Zimmermann
8bb3cef417 riexp fix 2024-04-07 00:15:22 +02:00
Christian Zimmermann
7db80fd255 im com 2024-04-03 23:53:53 +02:00
Christian Zimmermann
2fddb42e6c im com 2024-04-02 00:48:15 +02:00
Christian Zimmermann
ec30ad5839 mpi: implement experimental program for data transfer algorithms used for non-local operations 2024-03-28 00:56:22 +01:00
Christian Zimmermann
e65635cb0e im com 2024-03-27 00:28:32 +01:00
Christian Zimmermann
c972a9db52 WIP: rank op (concept) 2024-03-26 00:36:29 +01:00
Christian Zimmermann
6a433b237e rrange test: remove break 2024-03-24 23:47:15 +01:00
Christian Zimmermann
5d76ae6e36 rindex: distinguish between lex and pos 2024-03-24 02:42:45 +01:00
Christian Zimmermann
d9a546a5cc fix yrange at() 2024-03-23 20:52:57 +01:00
Christian Zimmermann
236a5b1b81 fix/implement missing broadcasts + fix at() for mrange/rrange 2024-03-23 20:46:49 +01:00
Christian Zimmermann
9b2b1be170 im com 2024-03-22 02:50:42 +01:00
Christian Zimmermann
dc2c239650 ranges: getMeta(): return size when out of scope (no throw) 2024-03-22 00:26:58 +01:00
Christian Zimmermann
c1acda90f0 fix in obj_handle + mpi: RArray test works 2024-03-21 01:18:21 +01:00
Christian Zimmermann
c43698dc10 array objects: copy function 2024-03-20 22:15:22 +01:00
Christian Zimmermann
bd2af23b15 WIP: MPI: RAIndex + RCArray + corresp tests 2024-03-20 01:19:40 +01:00
Christian Zimmermann
38e90bc2c6 WIP: RArray types + RAIndex 2024-03-18 00:21:26 +01:00
Christian Zimmermann
ef5b0ac456 MPI: RRange unit test works 2024-03-16 23:30:35 +01:00
Christian Zimmermann
bd8970ae33 URange cast for PRanges + fix mpi test 2024-03-16 17:25:37 +01:00
Christian Zimmermann
f55c38cc65 WIP: rrange + corresp test 2024-03-15 02:08:01 +01:00
Christian Zimmermann
f7c7cd3363 WIP: mpi 2024-03-14 14:41:48 +01:00
Christian Zimmermann
af47dd01f9 yrange()/mrange(): add xpl version 2024-03-13 19:10:04 +01:00
Christian Zimmermann
21a2ca0b72 WIP: rrange 2024-03-13 01:38:13 +01:00
Christian Zimmermann
93ff79194e WIP: mpi... 2024-03-12 20:13:18 +01:00
Christian Zimmermann
6edd39de37 WIP: RRange 2024-03-12 00:44:23 +01:00
Christian Zimmermann
6bfba5cdd9 WIP: mpi 2024-03-11 19:11:38 +01:00
Christian Zimmermann
5db90864c7 WIP: mpi related ranges 2024-03-10 23:56:33 +01:00
Christian Zimmermann
94367c60ac WIP: RIndex + ROp types 2024-03-07 00:41:43 +01:00
Christian Zimmermann
194cc4ebad WIP: add rrange 2024-03-04 23:55:11 +01:00
Christian Zimmermann
6e9317d7fe lutest + corresponding fixes 2024-03-04 02:28:42 +01:00
Christian Zimmermann
690b0d0830 WIP: ltest 2024-03-03 18:31:13 +01:00
Christian Zimmermann
954b072dc7 WIP: mpi 2024-02-29 00:20:57 +01:00
Christian Zimmermann
733e479498 bin/config: add option for getting build definitions 2024-02-24 18:54:20 +01:00
Christian Zimmermann
b20de211ef remove some code that has been already commented out
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-03 23:35:29 +01:00
Christian Zimmermann
8a0fdf7a7c improve comment notation + add missing briefs
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-03 23:21:40 +01:00
Christian Zimmermann
c478bf0fae more documentation + clean up
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-03 22:02:01 +01:00
Christian Zimmermann
5eff4cfe3f improve doxygen setup
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-03 18:35:13 +01:00
Christian Zimmermann
871910355d cereal documentation
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-03 16:44:34 +01:00
Christian Zimmermann
dc7137f400 hdf5: fix oinfo bug occuring for older hdf5 versions
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-02-02 20:28:22 +01:00
Christian Zimmermann
2023d64a5f hdf5: clean up + fixes
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-02 19:25:09 +01:00
Christian Zimmermann
190032729a urange: fix bug (seg fault) in getMeta
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-02 16:27:18 +01:00
Christian Zimmermann
27466f6ef1 hdf5: fix doxy errors + remove some unused code
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-02 15:11:03 +01:00
Christian Zimmermann
c46d9b1772 hdf5: virtual function exists() in ContentBase + hdf5 header documentation
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-02-02 14:51:51 +01:00
Christian Zimmermann
1f7ebae61b WIP: hdf5 documentation
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-02 12:13:54 +01:00
Christian Zimmermann
26831adb94 fix compile error
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-02-02 11:55:27 +01:00
Christian Zimmermann
be3f5521e8 WIP: hdf5 documentation
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-02-02 00:36:14 +01:00
Christian Zimmermann
eb3055ddca hdf5: several fixes + yrange: add setSub member function + dindex: add missing operator*(dindex,index)
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-02-01 18:22:08 +01:00
Christian Zimmermann
6f3601daa4 hdf5: dataset
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-02-01 00:11:20 +01:00
Christian Zimmermann
e2e233b931 im com
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-31 19:09:04 +01:00
Christian Zimmermann
df228d545b WIP: hdf5: Dataset
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-31 00:16:34 +01:00
Christian Zimmermann
84f18e1d5e hdf5: groups: handle paths to access sub-content objects
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-30 19:18:33 +01:00
Christian Zimmermann
39c0a3146f hdf5: table: iterRecords + test
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-30 01:13:58 +01:00
Christian Zimmermann
f7c00eab8c improve table read / readRecord
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-30 00:14:06 +01:00
Christian Zimmermann
e3ad04e56c add table read functions
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-28 23:39:27 +01:00
Christian Zimmermann
b2637802be changes in STable
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-28 16:42:11 +01:00
Christian Zimmermann
30a3c0b756 fixes in to_string + h5 attributes
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-28 01:57:52 +01:00
Christian Zimmermann
035ae78785 h5: simple attribute handling (to be tested)
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-25 01:19:26 +01:00
Christian Zimmermann
d5b42c9c00 hdf5: group iterations
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-23 02:17:56 +01:00
Christian Zimmermann
f77132ddfe hdf5: fix group mkCont + improve error handling of urange/yrange at()
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2024-01-22 00:03:08 +01:00
Christian Zimmermann
0bfee171e0 add POpRoot class + prange: implement xpr()
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-20 22:38:15 +01:00
Christian Zimmermann
91f9a3c957 prange: add missing extend() implementation
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-20 21:33:40 +01:00
Christian Zimmermann
21a11eb4f6 ranges: add remaining doxy comments
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-19 23:32:41 +01:00
Christian Zimmermann
a5031d80b1 prange comments
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-17 22:57:18 +01:00
Christian Zimmermann
ac352206c7 more doc
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-14 23:57:42 +01:00
Christian Zimmermann
4c71fac091 more documentation; WIP: mrange doc
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-13 18:26:28 +01:00
Christian Zimmermann
0eb505f41b yrange: solve lower-dim-reformat issue
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-03 19:18:20 +01:00
Christian Zimmermann
d66164e874 mrange: solve lower-dim-reformat issue
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2024-01-03 11:54:06 +01:00
Christian Zimmermann
e3f8fa17ba yrange/yindex: comments
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2023-12-30 18:10:07 +01:00
Christian Zimmermann
7376905928 doxy: use readme as main page
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2023-12-30 00:09:29 +01:00
Christian Zimmermann
e8db02a6ec more doc
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2023-12-29 22:48:28 +01:00
Christian Zimmermann
6857e3fc7d yindex+mindex: reformat: todo errmsg
All checks were successful
ci/woodpecker/push/woodpecker Pipeline was successful
2023-12-29 00:36:52 +01:00
Christian Zimmermann
ab4cb78258 WIP: index format
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-28 21:57:05 +01:00
Christian Zimmermann
c72fbc329d WIP: index format test + fixes...
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-28 00:25:44 +01:00
Christian Zimmermann
bf83c26a12 index reformat: apply format change to same instance (no copy)
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-25 22:07:39 +01:00
Christian Zimmermann
62b75c01a0 WIP: reformat tests
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-25 15:08:40 +01:00
Christian Zimmermann
df2a8e5a0b WIP: index reformat: mindex: do not copy single-indices
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-22 01:52:49 +01:00
Christian Zimmermann
4b9c8e94dc WIP: index reformat
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-19 18:43:05 +01:00
Christian Zimmermann
00eb2d2fb1 WIP: reformat
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-19 02:08:15 +01:00
Christian Zimmermann
642381ecc0 YRange: bug fix in deepFormat + add setFormat + array: bug fix in check format
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-11 02:20:02 +01:00
Christian Zimmermann
fb8a44e88b WIP: todos in array operator(), operator[]
Some checks failed
ci/woodpecker/push/woodpecker Pipeline failed
2023-12-11 01:11:49 +01:00